Job Description P09980 Confidence 98.39% Date Thu Jan 5 11:02:33 GMT 2012 Rank 41 Aligned Residues 81 % Identity 14% Template c1xtkA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:probable atp-dependent rna helicase p47; PDBTitle: structure of decd to dead mutation of human uap56 Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	L	N	P	G	Q	Q	Q	A	V	E	F	.	.	V	T	G	P	C	L	V	L	A	G	A	G	S	G	K	T	R	V	I	T	N	K	I	A	H	L	I	R	G	C	G	Y	Q	A	R	H	I	A	A	V	T	F	T	N	K	A	A	R	E	M	K	E	R	V	G	Q	T	L	G	R	K	E	A	R	G	L
Query Conservation														.	.
Alig confidence														.	.																																			.
Template Conservation																																																		.
Template Sequence		H	P	S	E	V	Q	H	E	C	I	P	Q	A	I	L	G	M	D	V	L	C	Q	A	K	S	G	M	G	K	T	A	V	F	V	L	A	T	L	Q	Q	L	E	P	V	T	G	Q	V	.	S	V	L	V	M	C	H	T	R	E	L	A	F	Q	I	S	K	E	Y	E	R	F	S	K	Y	M	P	N	V	K	V
Template Known Secondary structure																T	T									S	S	T	T																	T	T			.							S																T	T	T		T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	F	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions