Return to main results Retrieve Phyre Job Id

Job DescriptionP09980
Confidence97.96%DateThu Jan 5 11:02:33 GMT 2012
Rank73Aligned Residues72
% Identity17%Templatec1a1vA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:protein (ns3 protein); PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.... .....
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Query Sequence  VEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRK. . . . . . . . . . . EARGL
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Template Sequence  VPQSFQVAHLHAPTGSGKSTKV. . . PAAYAAQGY. . . . KVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPI
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   193......200.........210.... .....220... ......230.........240.........250.........260.....
 
   80.........
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Query Sequence  MISTFHTLGL
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Template Sequence  TYSTYGKFLA
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   266...270.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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