Return to main results Retrieve Phyre Job Id

Job DescriptionC0Z3Y0
Confidence15.60%DateWed Jan 25 15:20:04 GMT 2012
Rank13Aligned Residues49
% Identity24%Templated1gcca_
SCOP infoDNA-binding domain DNA-binding domain GCC-box binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.. .......60.........70.........80..
Predicted Secondary structure 









.











Query SS confidence 























.





























Query Sequence  SVRISPKGVIQFQYRYRWHGKPNR. LGLGRYPSLSLKDARQITADLRKLYFSGTD
Query Conservation   
 
  

 

   

   

   .  

  
  

  

  
         
 
Alig confidence 








..












.








...

















Template Conservation 

  
  

..
 
 

       
  



 
 ...







 

    
  
Template Sequence  GVRQRPWGK. . FAAEIRDPAKNGARVWLGTFETA. . . EDAALAYDRAAFRMRGSR
Template Known Secondary structure  TTTT..TTTTSSS...SS
Template Predicted Secondary structure 






..











...



Template SS confidence 






















































   148.150...... ...160.........170......... 180.........190.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions