Return to main results Retrieve Phyre Job Id

Job DescriptionC0Z3Y0
Confidence7.45%DateWed Jan 25 15:20:04 GMT 2012
Rank26Aligned Residues54
% Identity15%Templatec3imoC_
PDB info PDB header:unknown functionChain: C: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass14
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.......
Predicted Secondary structure 




























Query SS confidence 
























































Query Sequence  MAISDTKLRTIYGKPYSGPQEVADADGLSVRISPKGVIQFQYRYRWHGKPNRLGLGR
Query Conservation 
 


  
     
   
     
  

 
 
  

 

   

   

     

 
Alig confidence 
































...




















Template Conservation    




 
 

   
   
 
   






 ...








  
  



 

Template Sequence  EEIALALAGAILWRKDDTNIKVMAKNVLWVTIN. . . GERYAFSYNHSSEKIEMRKGN
Template Known Secondary structure  B
SS



T...TTTTTS
Template Predicted Secondary structure 








...




Template SS confidence 
























































   30.........40.........50.........60.. .......70.........80...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions