Job Description C0Z3Y0 Confidence 97.94% Date Wed Jan 25 15:20:04 GMT 2012 Rank 3 Aligned Residues 87 % Identity 21% Template c1z1bA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:integrase; PDBTitle: crystal structure of a lambda integrase dimer bound to a2 coc' core site Resolution 3.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	D	G	L	S	V	R	I	S	P	K	G	V	I	Q	F	Q	Y	R	Y	R	W	H	G	K	P	N	R	L	G	L	G	R	Y	P	S	L	S	L	K	D	A	R	Q	I	T	A	D	L	R	K	L	Y	F	S	G	T	D	P	R	T	Y	F	E	E	K	V	E	N	S	M	T	V	A	Q	C	L	D	Y
Query Conservation
Alig confidence																												.	.																														.	.	.
Template Conservation																												.	.																														.	.	.
Template Sequence		E	R	R	D	L	P	P	N	L	Y	I	R	N	N	G	Y	Y	C	Y	R	D	P	R	T	G	K	.	.	E	F	G	L	G	R	D	R	R	I	A	I	T	E	A	I	Q	A	N	I	E	L	F	S	G	H	K	H	K	.	.	.	P	L	T	A	R	I	N	S	D	N	S	V	T	L	H	S	W	L	D	R
Template Known Secondary structure								T	T					T	T	T							T	T	T			.	.						S																								.	.	.											S		B
Template Predicted Secondary structure																												.	.																														.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		104	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	D	N	Y	V	S	T	T	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	K	I	L	A	S	R	G	I	K	Q
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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