Return to main results Retrieve Phyre Job Id

Job DescriptionP55799
Confidence35.75%DateThu Jan 5 12:06:13 GMT 2012
Rank67Aligned Residues49
% Identity16%Templated1gg4a1
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.... .....30.........40.........50.........60......
Predicted Secondary structure 


.



















Query SS confidence 







.









































Query Sequence  IWVVGDIH. GEYQLLQSRLHQLSFFPKIDLLISVGDNIDRGPESLDVLRLL
Query Conservation 
 





.
    
   
         
 

 





 
      
   
Alig confidence 







.













.


























Template Conservation    






 

 
  


  
 .     

 


 
 
 
      
  
Template Sequence  QLLLDDSYNANVGSXTAAVQVLA. EXPGYRVLVVGDXAELGAESEACHVQV
Template Known Secondary structure 

S


.SSS





TT
Template Predicted Secondary structure 





.











Template SS confidence 


















































   326...330.........340........ .350.........360.........370.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions