Job Description P55799 Confidence 97.77% Date Thu Jan 5 12:06:13 GMT 2012 Rank 58 Aligned Residues 195 % Identity 18% Template c3zu0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn) Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.	.	.																						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Query Sequence		H	I	W	V	V	G	D	I	H	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	.	.	.	.	.	L	D	V	L	R	L	L	N	Q	P
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation
Template Sequence		S	I	L	H	I	N	D	H	H	S	Y	L	E	P	H	E	T	R	I	N	L	N	G	Q	Q	T	K	V	D	I	G	G	F	S	A	V	N	A	K	L	N	K	L	R	K	K	Y	K	N	P	L	V	L	H	A	G	D	A	I	T	G	T	L	Y	F	T	L	F	G	G	S	A	D	A	A	V	M	N	A	G
Template Known Secondary structure										T	T			S									T	T																								S	S	S							S			S		S	S					T	T	T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	T	S	V	K	G	N	H	E	A	M	A	L	E	A	F	E	T	G	D	G	N	M	W	L	A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		N	F	.	.	.	.	.	.	.	H	Y	F	T	L	G	N	H	E	F	D	A	G	N	E	G	L	L	K	L	L	E	P	L	K	I	P	V	L	S	A	N	V	I	P	D	K	S	S	I	L	Y	N	K	W	K	P	Y	D	I	F	T	V	D	G	E	K	I	A	I	I	G	L	D	T	V	N	K	T	V	N
Template Known Secondary structure		T		.	.	.	.	.	.	.	S						S	G	G	G	T	T										T	T			S					S	S					T	T	S	T	T	T	T	S		B	S							T	T											S
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		118	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	K	E	I	A	E	S	E	L	L	W	P	V	D	R	V	Q	K	S	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	Q	Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D	N	I	Q	T	F	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	S	P	G	K	D	V	K	F	Y	D	E	I	A	T	A	Q	I	M	A	N	A	L	K	Q	Q	G	I	N	K	I	I	L	L	S	H	A	G	S	E	K	N	I	E	I	A	Q	K	V	N	D	I	D	V	I	V	T	G	D	S	H	Y	L	Y	G	N	D	E	L	R	S	L	K	L	P	V	I	Y	E
Template Known Secondary structure			S				T	T																			T	T	T										T													S	S								S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
												197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	N	Q	I	Y	I	D	T	G	S	P	N	S	G	R	L	S	F	Y	K	I	K
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.														.
Template Conservation																									.
Template Sequence		Y	P	L	E	F	K	N	P	N	G	E	P	V	F	V	M	E	G	W	A	Y	S	A	.	V	V	G	D	L	G	V	K
Template Known Secondary structure		S	S						T	T	S										S	T	T		.
Template Predicted Secondary structure																									.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions