Job Description P55799 Confidence 98.84% Date Thu Jan 5 12:06:13 GMT 2012 Rank 41 Aligned Residues 171 % Identity 23% Template c3t1iC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations Resolution 3.00 Å

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		16	.	.	.	20	.	.	.	.		.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure											.			.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.			.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	W	V	V	G	D	I	H	.	G	E	.	.	.	.	.	.	.	.	.	.	.	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	L	D	V	L	R	L	L	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.			.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.			.	.	.	.	.	.	.	.	.	.	.													.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		K	I	L	V	A	T	D	I	H	L	G	F	X	E	K	D	A	V	R	G	N	D	T	F	V	T	L	D	E	I	L	R	L	A	Q	.	E	N	E	V	D	F	I	L	L	G	G	D	L	F	H	E	N	K	P	S	R	K	T	L	H	T	C	L	E	L	L	R	K	Y	C	X	G	D	R	P	V	Q	F	E
Template Known Secondary structure											B	T	T	T	S	S		T	T	T	T	T															.		T	T		S						S		S	B	S	S	S	S																		B	S	S	S
Template Predicted Secondary structure																																					.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
													69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	P	W	F	T	S	V	K	G	N	H	E	A	M	A	L	E	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	G	D	G	N	M	W	L	A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	S	D	Q	S	N	L	N	I	S	I	P	V	F	S	I	H	G	N	H	D	D	P	T	G	A	D	A	L	C	A	L	D	I	L	S	C	A	G	F	V	N	H	F	G	R	S	X	S	V	E	K	I	D	I	S	P	V	L	L	Q	K	G	S	T	K	I	A	L	Y	G	L	G	S	I	P	D	E	R
Template Known Secondary structure				S	S						B		S								S	S	S			B	T	T	T	T	B										T	S										S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	.	.	.	.	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W	P	V	D	R	V	Q	K	S	L	N	G	E	L	Q	Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	R	X	F	V	N	K	K	V	T	X	L	R	P	K	E	D	E	N	S	W	F	N	L	F	V	I	H	Q	N	R	S	K	H	G	S	T	N	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	Q	F	L	D	D	F	I	D	L	V	I	W	G	H	E	H	E	C
Template Known Secondary structure								T	T								S	S		G	G	G									S			S		S	S	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S		T	T								S			S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		192	.	.					.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		N	I	Q	.	.	.	.	T	F	A	N	Q	I	Y	I	D	T	G	S
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		K	I	A	P	T	K	N	E	Q	Q	L	F	Y	I	S	Q	P	G	S
Template Known Secondary structure									T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions