Job Description P55799 Confidence 98.61% Date Thu Jan 5 12:06:13 GMT 2012 Rank 46 Aligned Residues 184 % Identity 18% Template c3ivdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.																			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.											.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.											.
Query Sequence		H	I	W	V	V	G	D	I	H	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	L	D	.	.	.	.	.	V	L	R	L	L	N	Q	P	W	F	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.											.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.											.
Template Conservation
Template Sequence		T	I	I	Y	T	N	D	L	H	A	H	V	E	P	Y	K	V	P	W	I	A	D	G	K	R	D	I	G	G	W	A	N	I	T	T	L	V	K	Q	E	K	A	K	N	K	A	T	W	F	F	D	A	G	D	Y	F	T	G	P	Y	I	S	S	L	T	K	G	K	A	I	I	D	I	X	N	T	X	P	F	D
Template Known Secondary structure										T	T			S		B			T	T	S	G	G	G	T	S		B																		S	S							S			S	S	S	S					T	T	T	T								T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		72	.	.	.	.	.	.	.	80																																																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	V	K	G	N	H	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	L	E	A	F	E	T	G	D	G	N	M	W	L	A	S	G	G	D	W	F	F	D
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																																	.
Template Sequence		A	V	T	I	G	N	H	E	F	D	H	G	W	D	N	T	L	L	Q	L	S	Q	A	K	F	P	I	V	Q	G	N	I	F	Y	Q	N	S	S	K	S	F	W	D	K	P	Y	T	I	I	E	K	D	G	V	K	I	G	V	I	G	L	H	G	V	F	A	F	N	D	T	V	S	A	A	T	R	V	G	I	.
Template Known Secondary structure							G	G	G	G	T	T										T	T		S	S		B				S				T	T	S	S		B	S	S	S		S							T	T																		S		G	G	G	S	T	T		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W	P	V	D	R	V	Q	K	S	L	N	G	E	L	Q	Q	I	N	G	A	D	Y	F	I
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		E	A	R	D	E	I	K	W	L	Q	R	Y	I	D	E	L	K	G	K	V	D	L	T	.	.	.	.	.	.	.	.	V	A	L	I	H	E	G	V	P	A	R	Q	S	S	X	G	G	T	D	V	R	R	A	L	D	.	.	.	.	.	.	.	.	K	D	I	Q	T	A	S	Q	V	K	G	L	D	I	L	I
Template Known Secondary structure																		T	T	T		S			.	.	.	.	.	.	.	.							S	S						S	S	G	G	G	S	S						.	.	.	.	.	.	.	.										S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		185	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		F	G	H	M	M	.	.	F	D	N	I	Q	T	F	A	N	Q	I	Y	I	D	T	G	S	P	N	S	G	R	L	S	F	Y	K	I
Query Conservation							.	.
Alig confidence							.	.																			.
Template Conservation																											.
Template Sequence		T	G	H	A	H	V	G	T	P	E	P	I	K	V	G	N	T	L	I	L	S	T	D	S	G	.	G	I	D	V	G	K	L	V	L
Template Known Secondary structure				S	S					S	S					T	T								S	T	.	T	S
Template Predicted Secondary structure																											.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions