Job Description P55799 Confidence 94.41% Date Thu Jan 5 12:06:13 GMT 2012 Rank 63 Aligned Residues 201 % Identity 7% Template c3e0jG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40														.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		P	S	T	R	Y	Q	K	I	N	A	H	H	Y	R	H	I	W	V	V	G	D	I	H	.	.	.	G	E	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	L	D	V	L	R	.
Query Conservation																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																									.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		L	A	P	Q	K	P	A	P	P	L	D	T	D	R	F	V	L	L	V	S	G	L	G	L	G	G	G	G	G	E	S	L	L	G	T	Q	L	L	V	D	V	V	T	G	Q	L	G	D	E	G	E	Q	C	S	A	A	H	V	S	R	V	I	L	A	G	N	L	L	S	H	L	T	K	K	T	Q	A	A	S	V
Template Known Secondary structure												S	S												B	T	S	S																	T	S	S	S									T	T								S		S	B
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
														65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	L	N	Q	P	W	F	T	S	V	K	G	N	H	E	A	M	A	L	E	A	F	E	T	G	D	G	N	M	W	L	A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	V	K	M	L	D	E	I	L	L	Q	L	S	A	S	V	P	V	D	V	M	P	G	E	F	D	P	T	N	Y	T	L	P	Q	Q	P	L	H	P	C	M	F	P	L	A	T	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	L	Q	L	V	T	N	P	Y	Q	A	T	I	D
Template Known Secondary structure																		S								T	T	S	S	S		S	S	S	S						G	G	G						T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						S	S						T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.																	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200
Predicted Secondary structure																																	.	.	.	.	.	.	.																																				.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																																				.	.	.	.	.
Query Sequence		N	I	K	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W	P	V	.	.	.	.	.	.	.	D	R	V	Q	K	S	L	N	G	E	L	Q	Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D	N	I	Q	T	F	A	N	.	.	.	.	.	Q	I
Query Conservation																																	.	.	.	.	.	.	.																																				.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation
Template Sequence		G	V	R	F	L	G	T	S	G	Q	N	V	S	D	I	F	R	Y	S	S	M	E	D	H	L	E	I	L	E	W	T	L	R	V	R	H	I	S	P	T	A	P	D	T	K	T	D	P	F	I	F	P	E	C	P	H	V	Y	F	C	G	N	T	P	S	F	G	S	K	I	I	R	G	P	E	D	Q	T	V	L
Template Known Secondary structure		T							S	S										S															B	T		S		T	T	S							T	T	S		S	S			S								S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		Y	I	D	T	G	S	P	N	.	S	G	R	L	S	F	Y	K	I	K
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		L	V	T	V	P	D	F	S	A	T	Q	T	A	C	L	V	N	L	R
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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