Job Description P55799 Confidence 98.88% Date Thu Jan 5 12:06:13 GMT 2012 Rank 40 Aligned Residues 191 % Identity 18% Template c2xmoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642 Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																											.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Query Sequence		I	N	A	H	H	Y	R	H	I	W	V	V	G	D	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																					.	.	.
Template Conservation																																																										.
Template Sequence		I	E	K	D	R	N	L	S	M	V	V	T	T	D	V	H	Y	F	A	P	S	L	T	D	N	G	K	A	F	E	K	Y	V	A	A	G	D	G	K	Q	L	A	Y	S	D	E	I	T	D	A	F	L	A	D	V	E	.	S	K	K	T	D	V	L	I	I	S	G	D	L	T	N	N	G	E	K	T	S	H	E
Template Known Secondary structure				S		S												B			G	G	G	B												T	S	T	T			G	G	G														.			T		S						S			B	S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
				60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.																																																							80	.
Predicted Secondary structure		.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	L	D	V	L	R	L	L	N	Q	P	.	.	W	F	T	S	V	K	G	N	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M
Query Conservation		.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.											.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	K	K	L	T	Q	V	E	K	N	G	T	Q	V	F	V	V	P	G	N	H	D	I	N	N	P	W	A	R	K	F	E	K	D	K	Q	L	P	T	D	T	I	S	P	T	D	F	S	K	I	Y	S	D	F	G	Y	E	D	A	I	S	S	D	E	F	S	L	S	Y	L	A	A	P	S	S	K	V	W
Template Known Secondary structure													T	T									T	T	T	S	S		T	T						T	T																	T						T	T		S				S	S	S	S						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	A	F	E	T	G	D	G	N	M	W	L	A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.						.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.						.	.	.	.	.
Template Sequence		L	L	M	L	D	T	A	I	Y	K	T	N	M	Q	Q	G	N	P	T	T	E	G	G	L	T	A	G	T	L	D	W	I	K	E	S	S	A	L	A	K	K	N	G	A	K	L	.	.	.	.	.	.	.	.	I	P	V	L	H	.	.	.	.	.	H	N	L	T	D	H	N	D	V	Q	K	G	Y	T	I	N
Template Known Secondary structure								B			T	T					T	S					B																				T	T				.	.	.	.	.	.	.	.					S	.	.	.	.	.	S	B	S	S			S				T	T	S	B		T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.						.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.						.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.									.	.
Query SS confidence																																							.	.	.	.	.									.	.
Query Sequence		P	V	D	R	V	Q	K	S	L	N	G	E	L	Q	Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D	N	I	Q	T	F	A	N	.	.	.	.	.	Q	I	Y	I	D	T	G	S	.	.	P	N	S	G	R	L	S	F	Y	K	I	K
Query Conservation																																							.	.	.	.	.									.	.
Alig confidence												.	.	.	.	.																							.	.	.	.	.									.	.
Template Conservation												.	.	.	.	.
Template Sequence		Y	N	Q	Q	V	I	D	A	L	T	.	.	.	.	.	E	G	A	M	D	F	S	L	S	G	H	I	H	T	Q	N	I	R	S	A	K	S	T	D	G	K	E	I	T	D	I	V	T	N	A	L	S	V	F	P	H	K	Y	G	N	I	T	Y	S
Template Known Secondary structure		T										.	.	.	.	.		T	T								S	S		S									T	T	S											T	T	S	T	T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions