Job Description P55799 Confidence 99.07% Date Thu Jan 5 12:06:13 GMT 2012 Rank 38 Aligned Residues 170 % Identity 17% Template c2q8uA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exonuclease, putative; PDBTitle: crystal structure of mre11 from thermotoga maritima msb8 (tm1635) at2 2.20 a resolution Resolution 2.20 Å

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		16	.	.	.	20	.	.	.	.		.	.																.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.									70
Predicted Secondary structure											.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.	.	.
Query SS confidence											.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.	.	.
Query Sequence		H	I	W	V	V	G	D	I	H	.	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	.	P	E	S	L	D	V	L	R	L	L	N	Q	P	.	.	.	.	.	.	.	.	W
Query Conservation											.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.														.	.	.	.	.	.	.	.
Alig confidence											.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																		.														.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		K	I	L	H	T	S	D	W	H	L	G	V	T	S	W	T	S	S	R	P	V	D	R	R	E	E	L	K	K	A	L	D	K	V	V	E	E	A	E	.	K	R	E	V	D	L	I	L	L	T	G	D	L	L	H	S	R	N	N	P	S	V	V	A	L	H	D	L	L	D	Y	L	K	R	X	X	R	T	A	P
Template Known Secondary structure											B	T					T	T	T																						.			T		S						S		S	B	S		S	S																					S
Template Predicted Secondary structure																																									.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	S	V	K	G	N	H	E	.	.	.	.	.	.	.	.	.	.	.	A	M	A	L	E	A	F	E	T	G	D	G	N	M	W	L	A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	Y	A	I	A
Query Conservation											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	L	P	G	L	K	L	F	G	N	F	V	T	S	I	S	S	D	I	T	F	V	X	S	F	E	P	V	D	V	E	A	K	R	G	Q	K	V	R	I	L	P	F	P	Y	P	K	N	E	G	D	F	R	F	F	L	E	S	R	L	N	K	L	Y	E	E	A	L	K	K	E	D	F	A	I	F	X	G
Template Known Secondary structure																				S	S						S	S	S							T	T	S														S	S																			T		S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W	P	V	D	R	V	Q	K	S	L	N	G	E	L	Q	Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D	N	I	Q	T	F	A	N	Q	I	Y	I	D	T	G	S
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		H	F	T	V	E	G	L	A	R	E	I	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	A	L	I	P	S	V	V	D	Y	A	A	L	G	H	I	H	S	F	R	E	I	Q	K	Q	P	L	T	I	.	Y	P	G	S
Template Known Secondary structure			S			T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S		T	T	S	S						S		S	S							T	T				.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.																				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions