Job Description P55799 Confidence 99.82% Date Thu Jan 5 12:06:13 GMT 2012 Rank 23 Aligned Residues 145 % Identity 18% Template c2kknA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	I	W	V	V	G	D	I	H	G	E	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	L	D	V	L	R	L	L	N	Q	P	W	F	T	S	V	K	G	N	H	E	A	M	A	L	E	A	F	E	T	G	D	G	N	M	W
Query Conservation
Alig confidence																																									.	.													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	F	L	L	I	S	D	S	H	V	P	V	R	M	A	S	L	P	D	E	I	L	N	S	L	K	E	Y	D	G	V	I	G	L	G	D	Y	V	.	.	D	L	D	T	V	I	L	L	E	K	F	S	.	K	E	F	Y	G	V	H	G	N	M	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												B	T	T	T	T										G	G	G	G		S					S	S		B	S	.	.												T	.	S	S							S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W	P	V	D	R	V	Q	K	S	L	N	G	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	V	K	E	H	L	P	F	S	K	V	L	L	V	E	G	V	T	I	G	M	C	H	G	W	G	A	P	W	D	L	K	D	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	T	S		S							T	T								S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																					.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D	N	I	Q	T	F	A	N	Q	I	Y	I	D	T	G	S	P	N	S	G	R	L	S	F	Y	K	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	N	E	K	P	Q	V	I	L	F	G	H	T	H	E	P	E	D	T	V	K	A	G	V	R	F	L	N	P	G	S	L	A	E	G	S	Y	A	V	L	E	L	D
Template Known Secondary structure			S	S	S			S						S		S	S							T	T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions