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Job DescriptionP55799
Confidence100.00%DateThu Jan 5 12:06:13 GMT 2012
Rank3Aligned Residues194
% Identity25%Templatec2dfjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:diadenosinetetraphosphatase; PDBTitle: crystal structure of the diadenosine tetraphosphate2 hydrolase from shigella flexneri 2a
Resolution2.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60......... 70.........80.........90....
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Query Sequence  IWVVGDIHGEYQLLQSRLHQLSFFPKIDLLISVGDNIDRGPESLDVLRLLNQP. . WFTSVKGNHEAMALEAFETGDGNMW
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Template Sequence  TYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKP
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S
TT

TTT

S

SSSSS
TGGG


TTSS


G
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  LASGGDWFFDLNDSEQQEAIDLLLKFHHLPHIIEITNDNIKYAIAHADYPGSEYLFGKEIAESELLWPVDRVQKSLNGEL
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Template Sequence  KDRLTPLLEAP. . . . . . DADELLNWLRRQPLLQID. . EEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDA
Template Known Secondary structure  GG

TST......TTS
S..TTTTSS


TT

STT
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   83......90... ......100.........110. ........120.........130.........140.........150....
 
   175 ....180.........190 ...
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Query Sequence  Q. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QINGADYFIFGHMMF. DNI
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Template Sequence  MYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGK
Template Known Secondary structure  TT
S


S

TT

T

TTBSS

S
GGG

SS
GGGS

TTTTTS


GGGTT
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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   194.....200.........210........
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Query Sequence  QTFANQIYIDTGSPNSGRLSFYKIK
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Template Sequence  GTPEGIYALDTGCCWGGSLTCLRWE
Template Known Secondary structure  S

TT



TTTTSTT
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   235....240.........250.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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