Job Description P55799 Confidence 99.78% Date Thu Jan 5 12:06:13 GMT 2012 Rank 26 Aligned Residues 150 % Identity 17% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	W	V	V	G	D	I	H	G	E	Y	Q	L	L	Q	S	R	L	H	Q	L	S	F	F	P	K	I	D	L	L	I	S	V	G	D	N	I	D	R	G	P	E	S	L	D	V	L	R	L	L	N	Q	P	W	F	T	S	V	K	G	N	H	E	A	M	A	L	E	A	F	E	T	G	D	G	N	M	W	L
Query Conservation
Alig confidence																									.																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	G	I	M	S	D	T	H	D	H	L	P	N	I	R	K	A	I	E	I	F	N	.	D	E	N	V	E	T	V	I	H	C	G	D	F	V	S	.	.	.	L	F	V	I	K	E	F	E	N	L	N	A	N	I	I	A	T	Y	G	N	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T														.	T	S			S						S				S	.	.	.	T						G	G	G			S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	G	D	W	F	F	D	L	N	D	S	E	Q	Q	E	A	I	D	L	L	L	K	F	H	H	L	P	H	I	I	E	I	T	N	D	N	I	K	Y	A	I	A	H	A	D	Y	P	G	S	E	Y	L	F	G	K	E	I	A	E	S	E	L	L	W	P	V	D	R	V	Q	K	S	L	N	G	E	L	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	E	R	C	K	L	K	E	W	L	K	D	I	N	E	E	N	I	I	D	D	F	I	S	V	E	I	D	D	L	K	F	F	I	T	H	G	H	H	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	E	M	A	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.															T	T					S							T	T								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																									.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		Q	I	N	G	A	D	Y	F	I	F	G	H	M	M	F	D	N	I	Q	T	F	A	N	Q	I	Y	I	D	T	G	S	P	N	.	.	.	.	.	S	G	R	L	S	F	Y	K	I	K
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.
Template Conservation
Template Sequence		K	S	G	L	Y	D	V	V	I	Y	G	H	T	H	E	R	V	F	E	E	V	D	D	V	L	V	I	N	P	G	E	C	C	G	Y	L	T	G	I	P	T	I	G	I	L	D	T	E
Template Known Secondary structure							S						S	S									T	T									S	S		T	T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions