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Job DescriptionP13033
Confidence99.84%DateThu Jan 5 11:33:29 GMT 2012
Rank87Aligned Residues274
% Identity22%Templated1kf6a2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20..... ....30..... ....40.........50.........60.........70......
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Query Sequence  MRFDTVIMGGGLAGLLCGLQLQKHG. . LRCAIVTRGQ. . SALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPY
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Template Sequence  FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV.
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GGGSGGGG

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STT

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   3......10.........20.........30.........40.........50.........60.........70.........80.
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  SLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAA
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Template Sequence  . . . . VDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTL. . . . . . . . . . . . . . . . . .
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B
TTSSB

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   82.......90.........100.........110.........120.........130.........
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  ASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLN
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   237..240.........250.........260.........270.........280.........290.... .....300.........310...
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Query Sequence  EKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWT. . . RNHADIPLRPRFAVLASGS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . FQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGG
Template Known Secondary structure  .........................TT
TTTTTTTTT
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   314.....320.........330.........340.........350.........360.........370.........380...... ...390..
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Query Sequence  FFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLG. GFDPIA
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Template Sequence  AGR. . . . . . . . . . . . VYRYNTNGGIVTGDGMGMALSHGVPLRDMGGIETDQNCETR. . . . . IKGLFAVGECSSVGLHGAN
Template Known Secondary structure 
GG............GSSS
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GGG
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   195.. ..200.........210.........220.........230........ .240.........250.......
 
   393...... 400.........410.........
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Query Sequence  QGCGGGV. . CAVSALHAAQQIAQRAGGQQ
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Template Sequence  RLGSNSLAELVVFGRLAGEQATERAATAG
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TTS

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   390.........400.........410........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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