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Job DescriptionP13033
Confidence99.45%DateThu Jan 5 11:33:29 GMT 2012
Rank147Aligned Residues333
% Identity14%Templated1kdga1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  FDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQ
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Template Sequence  YDYIIVGAGPGGIIAADRLSEAGKKVLLLERG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

STT


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   217..220.........230.........240........
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  RVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLREL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKDITV
Template Known Secondary structure  ................................


SGGGT




GGGGGGT

TTT
GGGGGGGGT
S

TTB
TT
SS
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   249250.........260.........270.........280.........290......
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  GLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCS
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Template Sequence  FAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQGYN
Template Known Secondary structure 

B
STTGGGGTS

B




GGGG
GGGT

GGGS

S

BS

STTS


S
TTT
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   297..300.........310.........320.........330.........340.........350.........360.........370......
 
   243......250...... ...260.........270.........280.........290..... ....300.
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Query Sequence  LMLLPTLPPSVLGI. . . . . . . . . . . . . . . RLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTR. . . . . . NHADIP
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Template Conservation                          
 
       
          
     
  
        

               
Template Sequence  QATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPV
Template Known Secondary structure 

GGGSTT

TT



B
TT
TT
TT
S

TTS
TTSSGGG
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   377..380.........390.........400.........410.........420.........430.........440.........450......
 
   302.......310.........320.........330.........340.........350.........360.........370 ... .....
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Query Sequence  LRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQ. AGQ. . TIENL
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Template Sequence  TPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVDSNVKVFGTNNL
Template Known Secondary structure 
STTBS
TSS

GGG
B


TT


B
S
TTT
SB
TT
BBTT
SS
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   457..460.........470.........480.........490.........500.........510.........520.........530......
 
   379380.........390.........400.........410.......
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Query Sequence  FAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGG
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Template Sequence  FIVDA. . GIIPHLPTGNPQGTLMSAAEQAAAKILALAGG
Template Known Secondary structure 
SG..GG
SS

SS
SSTT
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   718.720.. .......730.........740.........750....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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