Return to main results Retrieve Phyre Job Id

Job DescriptionP13033
Confidence99.68%DateThu Jan 5 11:33:29 GMT 2012
Rank122Aligned Residues221
% Identity19%Templated1feca1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD/NAD-linked reductases, N-terminal and central domains
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.... .....30.........40.........50.........60...... ...70..
Predicted Secondary structure 






.





















........




Query SS confidence 






















.









































. . . . . . . .





Query Sequence  RFDTVIMGGGLAGLLCGLQLQKH. GLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLES. . . . . . . . LRQQAP
Query Conservation   








 


 

  

  .
  
 



  

     
                       ........      
Alig confidence 






















.









































........





Template Conservation   






 




 

  

   
  
 


                                                
Template Sequence  AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL
Template Known Secondary structure  S

S


S
SSSBTTTBS
TT
SGGGGT


Template Predicted Secondary structure 


































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  AHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQA
Query Conservation                                                                                  
Alig confidence 



























































....................
Template Conservation                                      
                       ....................
Template Sequence  DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADP. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
GGG



TSTTSTTSSSST....................
Template Predicted Secondary structure 







































....................
Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140..
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  HLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLW
Query Conservation                                                                          
       
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  RWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASG
Query Conservation                                       
        
                        

 

 
 
Alig confidence  ..............................................................

















Template Conservation  ..............................................................       
    
 
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NSAVLETLDTEYILLATG
Template Known Secondary structure  ..............................................................TS



Template Predicted Secondary structure  ..............................................................



Template SS confidence 















































































   143......150.........160
 
   313......320.........330.........340.........350.........360.........370.........380.........390..
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  SFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
Query Conservation                                             
 


 

           








  

     
Alig confidence 



























.................











.....

















Template Conservation                       

     .................
 
 

    

..... 
 


 

         
Template Sequence  SWPQHLGIEVPRSQTLQLEKAGVEVAKN. . . . . . . . . . . . . . . . . GAIKVDAYSKTN. . . . . VDNIYAIGDVTDRVMLTP
Template Known Secondary structure  B








BS
TTS
GGGGT

B
TT.................S
B


TT
B
S.....STT
GGGG
S


Template Predicted Secondary structure 



















.................









.....








Template SS confidence 















































































   161........170.........180........ .190.........200 .........210........
 
   393......400.........410..
Predicted Secondary structure 


Query SS confidence 



















Query Sequence  QGCGGGVCAVSALHAAQQIA
Query Conservation     
 
 
   
  

  

Alig confidence  ......













Template Conservation  ...... 
  

  

  
 
Template Sequence  . . . . . . VAINEGAAFVDTVF
Template Known Secondary structure  ......
Template Predicted Secondary structure  ......
Template SS confidence 



















   336...340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions