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Job DescriptionP13033
Confidence99.89%DateThu Jan 5 11:33:29 GMT 2012
Rank56Aligned Residues279
% Identity15%Templated1d4ca2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.... .....40.........50........ .60.........70........
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Query Sequence  FDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRG. . QSALHFSSGSLDLLSHLPDGQPVT. . DIHSGLESLRQQAPAHPYSL
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Template Sequence  TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNINDP
Template Known Secondary structure 
S
SSTTT


SSSSS
TTGGG

S

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TTT
S
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   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  LEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAAS
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Template Sequence  ELVKVLANNSSDSIDWLTSMGADMTDVGRMG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT





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   206...210.........220.........230......
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  LRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEK
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   239240.........250.........260.........270.........280........ .290.........300.........310.....
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Query Sequence  LPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGV. . . VNEIWTRNHADIPLRPRFAVLASGSFF
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Template Sequence  GASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA
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SS

STTT

STT
TT

SSS


TTT
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T
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   316...320.........330.........340. ........350.........360.........370.........380......
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Query Sequence  SGGLVAERNGIREPILGLDVLQTATR. . . . . . . . . GEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLG
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Template Sequence  KNNERVSKYDPKLKGFKATNHPGATGDGLDVALQAGAATRDLEMGGLVIDTKAEVKSEKTGKP. . . . . ITGLYAAGEVTG
Template Known Secondary structure  T

GGGTT



S
TT
SSTTB








TT
BTTTSS.....
GGGB
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   317..320.........330.........340.........350.........360.........370......... 380.........390.
 
   387..390......... 400.........410.....
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Query Sequence  GFDPIAQGCGGGV. . CAVSALHAAQQIAQRA
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Template Sequence  GVHGANRLGGNAISDIVTYGRIAGASAAKFA
Template Known Secondary structure  SSSTTS

TT
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   538.540.........550.........560........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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