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Job DescriptionP13033
Confidence99.28%DateThu Jan 5 11:33:29 GMT 2012
Rank163Aligned Residues260
% Identity18%Templatec3nixF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:flavoprotein/dehydrogenase; PDBTitle: crystal structure of flavoprotein/dehydrogenase from cytophaga2 hutchinsonii. northeast structural genomics consortium target chr43.
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  DTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQR
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Template Sequence  DVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FPRFVIGESLLPR
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STT


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TT
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   7..10.........20.........30........ .40.........50.
 
   84.....90. ........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VLDLACQA. . QALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRE
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Template Sequence  CXEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNF. . . . . . . . . . . . . . . . . . . . . . .
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T


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   52.......60.........70.........80.........90.........100........
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPC
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   242.......250.........260.........270.........280.........290.... .....300.........310.........320
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Query Sequence  SLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWT. RNHADIPLRPRFAVLASGSFFSGGLV
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Template Sequence  . . . . . . . . . . . . . . . . . DKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRX
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S
TT
TTS
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GGG
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   109110.........120.........130.........140.........150.........160.........170.
 
   321........330.........340.........350.........
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Query Sequence  AERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FGLDKPSGFESRRTLFTHIKDVKRPVGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERXRAXIANE
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TT




TT
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   360.........370.........380.........390.........400.........410.........
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Query Sequence  . . . . . . . . . . . . . . . VTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
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Template Sequence  GHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPI. FSSGATFAXESGSKGGKLAVQFLKGEE
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S
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GGGT
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   257..260.........270.........280.........290.........300... ......310.........320.........330
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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