Job Description P13033 Confidence 99.94% Date Thu Jan 5 11:33:29 GMT 2012 Rank 39 Aligned Residues 385 % Identity 12% Template c2i0zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad(fad)-utilizing dehydrogenases; PDBTitle: crystal structure of a fad binding protein from bacillus2 cereus, a putative nad(fad)-utilizing dehydrogenases Resolution 1.84 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		M	R	F	D	T	V	I	M	G	G	G	L	A	G	L	L	C	G	L	Q	L	Q	K	H	G	L	R	C	A	I	V	T	R	G	Q	.	.	S	A	L	H	F	S	S	G	S	L	D	L	L	S	H	L	P	D	G	Q	P	V	T	D	I	H	S	G	L	E	S	L	R	Q	Q	A	P	A	H	P	Y	S	L
Query Conservation																																					.	.
Alig confidence																																					.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	Y	D	V	I	V	I	G	G	G	P	S	G	L	M	A	A	I	G	A	A	E	E	G	A	N	V	L	L	L	D	K	G	N	K	L	G	R	K	L	A	I	S	G	G	G	R	C	N	V	T	N	R	L	P	L	D	E	.	.	.	.	.	.	.	.	.	.	I	V	K	H	I	P	G	N	G	R	F
Template Known Secondary structure					S							S													T	T								S	S	S	S	S							T	G	G	G	T							S					.	.	.	.	.	.	.	.	.	.				T		T	B	T	G	G	G
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.													.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	P	Q	R	V	L	D	L	A	C	Q	A	Q	A	L	I	A	E	S	G	A	Q	L	Q	G	S	V	E	L	A	H	Q	R	V	T	P	L	G	T	.	.	.	.	.	.	.	.	.	.	.	.	L	R	S	T	W	L	S	S	P	E	V	P	V	W	P	L	P	A	K	K	I	C	V	V	G	I	S	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	S	A	F	S	I	F	N	N	E	D	I	I	T	F	F	E	N	L	G	V	K	L	K	E	E	D	H	G	R	M	F	P	V	S	N	K	A	Q	S	V	V	D	A	L	L	T	R	L	K	D	L	G	V	K	I	R	T	N	T	P	V	E	T	I	E	Y	E	N	G	Q	T	K	A	V	I	L	Q	T
Template Known Secondary structure		G							S												T	T							G	G	G					T	T																	T	T						S										T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	D	F	Q	A	H	L	A	A	A	S	L	R	E	L	G	L	A	V	E	T	A	E	I	E	L	P	E	L	D	V	L	R	N	N	A	T	E	F	R	A	V	N	I	A	R	F	L	D	N	E	E	N	W	P	L	L	L	D	A	L	I	P	V	A	N	T	C	E	M	I	L	M	P	A	C	F	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	V	L	E	T	N	H	V	V	I	A	V	G	G	K	S	V	P	Q	T	G	S	T	G	D	G	Y	A	W	A	E	K	A	G	H	T	I	T	E	L	F	P	T	E	V	P	I	L	S	N	E	P	F	I	R	D	R	S	L	Q	G	L	A	L	R	D	I	N	L	S	V	L	N	A	I	I	S	H	K
Template Known Secondary structure								S									S	S	S	G	G	G	S		S	S									T	T										S												T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
																			227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	D	K	L	W	R	W	L	N	E	K	L	P	C	S	L	M	L	L	P	T	L	P	P	S	V	L	G	I	R	L	Q	N	Q	L	Q	R	Q	F	V	R	Q	G	G	V	W	M	P	G	D	E	V	K	K	V	T	C	K	N	G	V	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		M	D	M	L	F	T	H	F	G	L	S	G	P	A	A	L	R	C	S	Q	F	V	V	K	A	L	K	K	F	K	T	N	T	I	Q	M	S	I	D	A	L	P	E	E	N	S	E	Q	L	F	Q	R	M	L	K	Q	M	K	E	D	P	K	K	G	I	K	N	V	L	K	G	Y	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S				S																				S								S		T	T	S														T	T	S	T	T	S	B					T	T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	I	W	T	R	N	H	A	D	I	P	L	R	P	R	F	A	V	L	A	S	G	S	F	F	S	G	G	L	V	A	E	R	N	G	I	R	E	P	I	L	G	L	D	V	L	Q	T	A	T	R	G	E	W	Y	K	G	D	F	F	A	P	Q	P	W	Q	Q	F	G	V	T	T	D	E	T	L	R	P	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	P	E	R	Y	F	L	F	L	L	E	K	N	E	I	D	G	S	E	Q	A	G	Q	V	S	H	E	K	I	R	A	L	V	K	D	F	K	E	F	T	V	N	V	N	G	T	Q	S	I	E	K	A	F	V	T	G	G	G	V	S	V	K	E	I	N	P	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S												T	T			T	T	S	B	G	G	G	S																									G	G	G		S	S							G	G	G			T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	G	Q	T	I	E	N	L	F	A	I	G	S	V	L	G	G	F	D	P	I	A	Q	G	C	G	G	G	V	C	A	V	S	A	L	H	A	A	Q	Q	I	A	Q	R	A	G
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		M	S	S	K	F	T	N	G	L	Y	F	C	G	E	V	L	D	I	.	H	G	Y	T	G	G	Y	N	I	T	S	A	L	V	T	G	R	I	A	G	T	T	A	G	E	N	A	K
Template Known Secondary structure		T			S	S	S	B	T					G	G	G	B	S		.	B			T	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420