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Job DescriptionP13033
Confidence99.92%DateThu Jan 5 11:33:29 GMT 2012
Rank43Aligned Residues276
% Identity14%Templatec2fjaC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:adenylylsulfate reductase, subunit a; PDBTitle: adenosine 5'-phosphosulfate reductase in complex with2 substrate
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30..... ....40.........50.........60.........70...
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Query Sequence  RFDTVIMGGGLAGLLCGLQLQK. . . . HGLRCAIVTRGQ. . . . SALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPA
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Template Sequence  ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM
Template Known Secondary structure 
S

SGGGT


SS
TTT
STTSS
S



SSSSBS



TT
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   2022.......2030.........2040.........2050.........2060.........2070.........2080.........2090.........2100.
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  HPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAH
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Template Sequence  GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESY. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T


TT

B
B
TTS
B
BSSSS
TT............................
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   2102.......2110.........2120.........2130.........2140.........2150...
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  LAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWR
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Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   234.....240.........250.........260........ .270.........280...... ...290... ......300.....
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Query Sequence  WLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVR. . QGGVWMPGDEVKKVTCKN. . . GVVNEIW. . . TRNHADIPLRPR
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Template Conservation  .........................   
   
        
        

      
 
 

       
      

Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . KPIIAEAAKMAVGEENIYERVFIFELLKDKNDPNAVAGAVGFSVREPKFYVFKAK
Template Known Secondary structure  .........................
GGG
S
TT
TTBSSSS

S
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   2154.....2160.........2170.........2180.........2190.........2200........
 
   306...310.........320.........330....
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Query Sequence  FAVLASGSFFSGGLVAERNGIREPILGLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AVILATGGATLLFRPRSTGEAAGRTWYAIFDTGSGYYMGLKAGAMLTQFEHRFIPFRFKDGYGPVGAWFLFFKCKAKNAY
Template Known Secondary structure 



B
SSS

S

SGGGG

SS
TT
BST

STT

B

TTT



TS



TT
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   22092210.........2220.........2230.........2240.........2250.........2260.........2270.........2280........
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation 
 

                           
   
   
      
               
                 
Template Sequence  GEEYIKTRAAELEKYKPYGAAQPIPTPLRNHQVMLEIMDGNQPIYMHTEEALAELAGGDKKKLKHIYEEAFEDFLDMTVS
Template Known Secondary structure  S

TSGGGTTSTTGGG
SS

TT



TT
TT
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   22892290.........2300.........2310.........2320.........2330.........2340.........2350.........2360........
 
   335....340.........350.........360 .........370.........380.......
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Query Sequence  . . . . VLQTATRGEWYKGDFFAPQPWQQFGV. . . . . . . . . . . . . . . . . . . . . . . TTDETLRPSQAGQTIENLFAIGSVLGG
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Template Sequence  QALLWACQNIDPQEQPSEAAPAEPYIMGSHSGEAGFWVCGPEDLMPEEYAKLFPLKYNRMTT. . . . . VKGLFAIGDCAGA
Template Known Secondary structure  TT

TTTS



BB
SSSS







TTT

TT
SS

TTB
S.....SBT
GGGB
S
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   23692370.........2380.........2390.........2400.........2410.........2420.........2430 .........2440...
 
   388.390.........400.........410.........
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Query Sequence  FDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
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Template Sequence  . . . . NPHKFSSGSFTEGRIAAKAAVRFILEQK
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   2444.....2450.........2460.........2470.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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