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Job DescriptionP13033
Confidence99.94%DateThu Jan 5 11:33:29 GMT 2012
Rank40Aligned Residues331
% Identity11%Templatec2cfyB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:thioredoxin reductase 1; PDBTitle: crystal structure of human thioredoxin reductase 1
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50.........60.........70.
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Query Sequence  RFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQ. . . . . . . . . . SALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQA
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Template Sequence  DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE
Template Known Secondary structure  S

STTT







TT




TTSTT



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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  PAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQ
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Template Sequence  ETVKHDW. . DRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG
Template Known Secondary structure  SS



..TT

TTTTS






S
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   92...... .100.........110.........120.........130.........140.........150.........160.........
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  AHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKL
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Template Conservation    .........................................                                     
Template Sequence  IP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGF
Template Known Secondary structure  ST.........................................T
B
TT
SS


S

S
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   170. ........180.........190.........200........
 
   232.......240.........250.........260.........270.........280....... ..290.........300.....
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Query Sequence  WRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNG. . . . . . VVNEIWTRNHADIPLRPR
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Template Sequence  LAGI. . . GLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYN
Template Known Secondary structure  T...T

SS
SSTTS
TT
S
STT
SSSS
S
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   209210.. .......220.........230.........240.........250.........260.........270.........280.....
 
   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  FAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVL
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Template Sequence  TVMLAIGRDACTRKIGLETVGVKINEKTG. . . . . . . . . . . . . . . . . . . . . . . . KIPVTDEEQTN. . . . . VPYIYAIGDIL
Template Known Secondary structure 
S
S
SSS
GGGTT



TTT
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B


TTSB
S.....STT
STTB
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   286...290.........300.........310.... .....320..... ....330......
 
   386...390.........400.........410..
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Query Sequence  GGFDPIAQGCGGGVCAVSALHAAQQIA
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Template Sequence  EDKVELTPV. . . . . AIQAGRLLAQRLY
Template Known Secondary structure  TTS


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   337..340..... ....350........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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