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Job DescriptionP13033
Confidence99.80%DateThu Jan 5 11:33:29 GMT 2012
Rank96Aligned Residues301
% Identity10%Templatec1yqzA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:coenzyme a disulfide reductase; PDBTitle: structure of coenzyme a-disulfide reductase from2 staphylococcus aureus refined at 1.54 angstrom resolution
Resolution1.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.... .....30.........40.........50.........60.........70.........80..
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Query Sequence  TVIMGGGLAGLLCGLQLQKH. . GLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQ
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Template Sequence  IVVVGAVAGGATCASQIRRLDKESDIIIFEKDR. . . . . . . . . . . . . . . . DMSFANCALPYVIGEVVEDRRYALAYT. . . .
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STT
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   4.....10.........20.........30...... ...40.........50.........60...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  RVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLREL
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Template Sequence  . . . . . . . . PEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQ. . . . . . . . . . . . . . . . . FEESYDKLILSPGASAN
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   64.....70.........80.........90.........100. ........110........
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  GLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCS
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Template Sequence  SLGFESDITFT. . . . . . . . . . . . . . . . . . . . . LRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYER. . GLHPT
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   119120......... 130.........140.........150.........160.........170 .....
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  LMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAE
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Template Sequence  LIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNE. . . . . . . ITFKSGKVEHYDMIIEGVGTHPNSKFIES
Template Known Secondary structure  SSS

STTS
GGGGTT

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   176...180.........190.........200.........210......... 220.........230.........240........
 
   323......330.........340.........350.........360.........370.........380.........390...... ..
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Query Sequence  RNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCG. . . . GG
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Template Sequence  SNIKLDRK. . . . . . . . . . . . . . . . . . . . . . . . . . . GFIPVNDKFETN. . . . . VPNIYAIGDIATSHYRHVDLPASVPLAW
Template Known Secondary structure  SS



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   249250...... ...260........ .270.........280.........290......
 
   399400.........410..
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Query Sequence  VCAVSALHAAQQIA
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Template Sequence  GAHRAASIVAEQIA
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   297..300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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