Return to main results Retrieve Phyre Job Id

Job DescriptionP13033
Confidence99.83%DateThu Jan 5 11:33:29 GMT 2012
Rank89Aligned Residues311
% Identity12%Templatec1vdcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadph dependent thioredoxin reductase; PDBTitle: structure of nadph dependent thioredoxin reductase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10.........20.........30..... ....40.........50.........60.........70......
Predicted Secondary structure 

...










.

























Query SS confidence 

. . .
































.








































Query Sequence  MR. . . FDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQ. SALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPY
Query Conservation 
 ...








 


 

  

  
  
 



  .

     
                                 
Alig confidence 

...
































.

























...............
Template Conservation 
     







 


 

  

  
  
 


                              ...............
Template Sequence  LETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGIL. . . . . . . . . . . . . . .
Template Known Secondary structure 


STT




SSBTTB
TT
GGGG
S

STT
TT
...............
Template Predicted Secondary structure 

































...............
Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.....
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  SLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAA
Query Conservation                                                                                  
Alig confidence  .......







































































.
Template Conservation  .......                                                                        .
Template Sequence  . . . . . . . GVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFVGSGEVLGGFW.
Template Known Secondary structure  .......TT






SSSS
SS







BT
SSSSS

B.
Template Predicted Secondary structure  .......


























.
Template SS confidence 















































































   61........70.........80.........90.........100.........110.........120.........130..
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  ASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLN
Query Conservation                                                                      
           
Alig confidence  ......................................






































...
Template Conservation  ......................................                     
     
      
    ...
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLT. . .
Template Known Secondary structure  ......................................TTTS
TTSGGGTTS

ST...
Template Predicted Secondary structure  ......................................














...
Template SS confidence 















































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions