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Job DescriptionP13033
Confidence99.78%DateThu Jan 5 11:33:29 GMT 2012
Rank101Aligned Residues259
% Identity20%Templatec1ps9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30..... ....40.........50.........60.........70.........80.
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Query Sequence  DTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQ. . SALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEP
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Template Sequence  NLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GK
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STTT
SSSSS
TTTTST.................................T
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   375....380.........390.........400.........410......... 420.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  QRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRE
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Template Sequence  EEFYETLRYYRRMIEVTGVTLKLNHTV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TADQLQAFDETILASGIVP
Template Known Secondary structure  TTT
S


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   422.......430.........440........ .450.........460.......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  LGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLP.
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Template Sequence  RTPPIDGI. . . . . . . . . . . . . . . . . . . . . . . . . DHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQ
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BTT.........................TSTTTS




S

T

SS
GGG
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   468.470..... ....480.........490.........500.........510.........520..
 
   241........250.........260.........270.........280.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCK
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Template Sequence  NIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDD
Template Known Secondary structure 
TTB
TT

SGGGB
TT






SS
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S
TTTTS
TTTTT

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TT
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   523......530.........540.........550.........560.........570.........580.........590.........600..
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  NGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDET
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Template Sequence  . . . . GLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ....TT

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   603......610.........620.........630.........640
 
   366...370.........380.........390.........400.........410.
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Query Sequence  LRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQI
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Template Sequence  . . . . . . . . . . KTVHLIGGCDVAMELDARR. . . . . AIAQGTRLALEI
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GGGT

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   641........650......... 660.........670.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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