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Job DescriptionP13033
Confidence99.67%DateThu Jan 5 11:33:29 GMT 2012
Rank123Aligned Residues307
% Identity15%Templatec1fcdB_
PDB info PDB header:electron transport(flavocytochrome)Chain: B: PDB Molecule:flavocytochrome c sulfide dehydrogenase (flavin- PDBTitle: the structure of flavocytochrome c sulfide dehydrogenase2 from a purple phototrophic bacterium chromatium vinosum at3 2.5 angstroms resolution
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TVIMGGGLAGLLCGLQLQKHG. . LRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQ
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Template Sequence  VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DYYTCYLSN
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STTTT
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Query Sequence  RVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLREL
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Template Sequence  EVI. . . . . . . . . . . . . . . . . GGDRKLESIKHGYDGLRAHGIQVVHDSATGIDPDKKLVKTAGGAEFGYDRCVVAPGIELI
Template Known Secondary structure  .................TSS
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Query Sequence  GLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGL. . . . . . . ADDKLWRWL
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Template Sequence  YDKIEGYSEEAAAKLPHA. . . . . . . . . . . . . . WKAGEQTAILRKQLEDMADGGTVVIAPPAAPFRCPPGPYERASQVAYY
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TTSTT

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Query Sequence  NEKLP. . CSLMLLPTLPPSVLG. . . . IRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVL
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Template Sequence  LKAHKPMSKVIILDSSQTFSKQSQFSKGWERLYGFGTENAMIEWHPGPDSAVVKVDGGEMMVETAFG. . . DEFKADVINL
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Query Sequence  ASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDET. LRPSQAGQTIENLFAIGSVLGGF
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Template Sequence  IPPQRAGKIAQIAGLTND. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGWCPVDIKTFESSI. . . . HKGIHVIGDASIAN
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BT.............................TTBB
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   253......260.........270 .........280..... ....290.........
 
   389390.........400.........410.........
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Query Sequence  DPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
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Template Sequence  PMPKSGYS. . . ANSQGKVAAAAVVVLLKGEE
Template Known Secondary structure  SS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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