 |
Job Description | P76201 | Confidence | 20.95% | Date | Thu Jan 5 12:20:26 GMT 2012 |
Rank | 232 | Aligned Residues | 105 |
% Identity | 10% | Template | d2gnpa1 |
SCOP info | NagB/RpiA/CoA transferase-like
| NagB/RpiA/CoA transferase-like
| SorC sugar-binding domain-like
|
Resolution | 1.65 |
|
 |
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
110 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
F | D | L | N | A | I | E | A | A | S | Q | L | A | T | D | D | D | E | I | A | A | L | T | V | G | G | S | L | L | Q | N | S | K | V | R | K | D | V | L | S | R | G | P | H | S | L | Y | . |
. |
L | V | Q | D | A | Q | L | E | H | A | L | P | L | D | T | A | K | A | L | A | A | A | I | E | K | I | G | . |
F | D | L |
Query Conservation |   |
  |
|   |   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |   |
| . | . |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |   | . |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
F | D | T | N | X | F | K | L | E | N | Y | V | K | E | K | Y | S | L | E | S | L | E | I | I | P | N | E | F | D | D | T | P | T | I | L | S | E | R | I | S | Q | V | A | A | G | V | L | R | N | L | I | D | D | N | X | K | I | G | F | S | W | G | K | S | L | S | N | L | V | D | L | I | H | S | K | S | V | R | N | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
113 | . | . | . | |
|
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Predicted Secondary structure |   |
 |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | F | G | . |
. |
. |
. |
. |
. |
E | G | S | G | D | L | Y | A | Q | Q | V | G | L | L | V | G | E | I | L | Q | L | P | V | I |
Query Conservation |   |
|
|   |
| . | . | . | . | . | . |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
H | F | Y | P | L | A | G | G | P | S | H | I | H | A | K | Y | H | V | N | T | L | I | Y | E | X | S | R | K | F | H | G | E | C | T |
Template Known Secondary structure |   |
 |  |  |  | S | B |
|
|
| T | T | S |
| G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|