 |
Job Description | P76201 | Confidence | 71.91% | Date | Thu Jan 5 12:20:26 GMT 2012 |
Rank | 46 | Aligned Residues | 69 |
% Identity | 16% | Template | c2ebdB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; |
PDBTitle: crystal structure of 3-oxoacyl-[acyl-carrier-protein] synthase iii2 from aquifex aeolicus vf5
|
Resolution | 2.10 Å |
|
 |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | P | H | S | L | Y | L | V | Q | D | A | Q | L | E | H | A | L | P | L | D | T | A | K | A | L | A | A | A | . |
I | E | K | I | G | F | D | L | L | I | F | G | E | G | S | G | D | L | Y | A | Q | Q | V | G | L | L | V | G | E | I | L | Q | L | P | V | I | N | A | V | S |
Query Conservation |   |
  |
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |   | . |
|
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
T | G | I | K | E | R | R | I | A | K | E | E | T | I | T | Y | M | A | T | Q | A | A | K | E | A | L | R | E | A | N | L | S | P | E | E | L | D | L | I | I | L | A | T | L | T | P | Q | K | R | F | P | S | T | A | C | L | V | Q | A | Q | L | K | A | K | G | V | Y | A | F | D |
Template Known Secondary structure |   |
 |
|
|
|  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
| S |  |  |  |  |  |
| S | S |
| S | S | S | S | S |
|  |  |  |  |  |  |  |  |  | T |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|