Job Description P76201 Confidence 99.96% Date Thu Jan 5 12:20:26 GMT 2012 Rank 5 Aligned Residues 179 % Identity 15% Template c1o94D_ PDB info PDB header:electron transport Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein Resolution 2.0 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	N	F	D	N	A	D	A	K	I	S	Q	F	D	L	N	A	I	E	A	A	S	Q	L	A	T	D	.	D	D	E	I	A	A	L	T	V	G	G	S	L	L	Q	N	S	K	V	R	K	D	V	L	S	R	G	P	H	S	L	Y	L	V	Q	D	A	Q	L	E	H	A	L	P	L	D	T	A	K	A	L	A
Query Conservation																													.
Alig confidence																													.																	.	.	.																					.
Template Conservation																																														.	.	.																					.
Template Sequence		V	I	A	E	H	R	R	N	D	L	R	P	V	S	L	E	L	I	G	A	A	N	G	L	K	K	S	G	E	D	K	V	V	V	A	V	I	G	S	Q	A	D	A	F	.	.	.	V	P	A	L	S	V	N	G	V	D	E	L	V	V	V	K	G	S	S	I	.	D	F	D	P	D	V	F	E	A	S	V	S
Template Known Secondary structure								T	T				T											T	T		S	S	T	T									S	T	T	G	G	G	G	.	.	.						B	T	T		S								S		S	.	S
Template Predicted Secondary structure																																														.	.	.																					.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		A	A	I	E	K	I	G	F	D	L	L	I	F	G	E	G	S	G	D	L	Y	A	Q	Q	V	G	L	L	V	G	E	I	L	Q	L	P	V	I	N	A	V	S	A	I	Q	R	Q	G	N	T	L	V	I	E	R	T	L	E	D	D	V	E	V	I	E	L	S	V	.	.	.	.	P	A	V	L	C	V	T	S
Query Conservation																																																																						.	.	.	.
Alig confidence																							.	.	.																																													.	.	.	.
Template Conservation																							.	.	.
Template Sequence		A	L	I	A	A	H	N	P	S	V	V	L	L	P	H	S	V	D	S	L	G	.	.	.	Y	A	S	S	L	A	S	K	T	G	Y	G	F	A	T	D	V	Y	I	V	E	Y	Q	G	D	E	L	V	A	T	R	G	G	Y	N	Q	K	V	N	V	E	V	D	F	P	G	K	S	T	V	V	L	T	I	R	P
Template Known Secondary structure										S							S					T	.	.	.	T							T	T	T														T	T									T	T	T	T								T	T		S								T
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	N	V	P	R	I	P	S	M	K	A	I	L	G	A	G	K	K	P	V	N	Q	W	Q	A	S	D	I	D	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	F	K	P	L	E	G	A	G	S	P	V	V	S	N	V	D	A	P	S	V	Q	S	R	S	Q	N	K	D	Y
Template Known Secondary structure		T	S	S					S	B																S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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