Return to main results Retrieve Phyre Job Id

Job DescriptionP39295
Confidence7.94%DateThu Jan 5 11:59:01 GMT 2012
Rank11Aligned Residues10
% Identity30%Templatec1lj2D_
PDB info PDB header:viral protein/ translationChain: D: PDB Molecule:eukaryotic protein synthesis initiation factor; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........
Predicted Secondary structure 





Query SS confidence 









Query Sequence  PCRNRYAQKY
Query Conservation    
 
     
Alig confidence 









Template Conservation 





 


Template Sequence  PKRERKTIRI
Template Known Secondary structure 









Template Predicted Secondary structure 






Template SS confidence 









   133......140..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions