 |
| Job Description | P64624 | | Confidence | 25.49% | Date | Thu Jan 5 12:10:00 GMT 2012 |
| Rank | 394 | Aligned Residues | 33 |
| % Identity | 12% | Template | d2p7vb1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
| Resolution | 2.60 |
|
| | |
201 | . | . | . | . | . | . | |
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
| Predicted Secondary structure | |
|
|  | | | |
| . | | | | | | | | | |
|
|
| | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | I | F | D | I | K | D | . |
A | I | N | Q | V | A | D | R | L | N | I | S | K | H | T | V | Y | L | Y | I | R | Q | F | K | S | G |
| Query Conservation | |
|
|
| |
|
|
| . |
|
| | |
|
| | |
|
|
|
|
| |
|
|
| |
|
| | |
|
| | |
| Alig confidence | |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | | | | | |
| | |
|
|
| | |
|
|
|
| | | |
|
|
| | | |
|
|
| |
|
| Template Sequence | |
G | I | D | M | N | T | D | Y | T | L | E | E | V | G | K | Q | F | D | V | T | R | E | R | I | R | Q | I | E | A | K | A | L | R | K |
| Template Known Secondary structure | |
T | T | T | S | S | S |
|
|
| | | | | | | | | T |
|
| | | | | | | | | | | | | | G |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
| | | | | | | | |
|
|
| | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
564 | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
