Return to main results Retrieve Phyre Job Id

Job DescriptionP64624
Confidence94.54%DateThu Jan 5 12:10:00 GMT 2012
Rank13Aligned Residues45
% Identity18%Templated2cg4a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200.........210.........220.........230...
Predicted Secondary structure 








Query SS confidence 
















































Query Sequence  SNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSG
Query Conservation 
   

  

  
  



 




  

  




 


 

  

  
Alig confidence 
















....



























Template Conservation   

  
  

  

   ....
 
  


  



  

  

  
   
Template Sequence  LIDNLDRGILEALMGNA. . . . RTAYAELAKQFGVSPETIHVRVEKMKQA
Template Known Secondary structure 



T....TS
TS
Template Predicted Secondary structure 




....






Template SS confidence 
















































   5....10.........20. ........30.........40.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions