Return to main results Retrieve Phyre Job Id

Job DescriptionP64624
Confidence25.66%DateThu Jan 5 12:10:00 GMT 2012
Rank393Aligned Residues62
% Identity15%Templated2a61a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 












Query SS confidence 







































































Query Sequence  VEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGD
Query Conservation 
 
 
   
   
         
   

  

  
  



 




  

  




 


 

  

   
Alig confidence 




















......











....




























Template Conservation 
                

  ......    
  
    ....  
  


  
      

  
  
   
Template Sequence  ICFMVKVEGRKVLRDFGITPA. . . . . . QFDILQKIYFEG. . . . PKRPGELSVLLGVAKSTVTGLVKRLEADG
Template Known Secondary structure  TTT

......
....
B
T

TT
Template Predicted Secondary structure 



......

....







Template SS confidence 







































































   15....20.........30..... ....40....... ..50.........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions