Return to main results Retrieve Phyre Job Id

Job DescriptionP64624
Confidence28.71%DateThu Jan 5 12:10:00 GMT 2012
Rank384Aligned Residues61
% Identity11%Templated1z91a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 












Query SS confidence 






































































Query Sequence  VEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSG
Query Conservation 
 
 
   
   
         
   

  

  
  



 




  

  




 


 

  

  
Alig confidence 





















......












....

























Template Conservation              
   


  
......  

  
      ....
  


         

  
  
   
Template Sequence  SSREMTKQYKPLLDKLNITYPQ. . . . . . YLALLLLWEHETL. . . . TVKKMGEQLYLDSGTLTPMLKRMEQQ
Template Known Secondary structure  TTSTTT


......S....TTT

Template Predicted Secondary structure 



......



....






Template SS confidence 






































































   21........30.........40.. .......50..... ....60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions