Job Description P64624 Confidence 79.34% Date Thu Jan 5 12:10:00 GMT 2012 Rank 210 Aligned Residues 75 % Identity 11% Template d1smyf2 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.70

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		S	S	V	N	F	A	S	S	V	E	D	L	V	T	Q	T	L	E	F	T	I	E	E	V	N	A	D	R	N	V	S	N	N	A	K	N	R	Q	I	V	L	N	L	Y	E	K	G	I	F	D	I	K	D	A	I	N	Q	V	A	D	R	L	N	I	S	K	H	T	V	.	.	.	.	Y	L	Y	I	R	Q	F
Query Conservation																																																																							.	.	.	.
Alig confidence																												.	.	.																	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																												.	.	.																	.	.	.	.	.	.	.
Template Sequence		P	D	E	H	L	P	S	P	V	D	A	A	T	Q	S	L	L	S	E	E	L	E	K	A	L	S	.	.	.	K	L	S	E	R	E	A	M	V	L	K	L	R	K	G	L	.	.	.	.	.	.	.	I	D	G	E	E	V	G	A	F	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L
Template Known Secondary structure				S	S	S			T																		T	.	.	.	T	S														T	.	.	.	.	.	.	.	T					T	T	T	S	S	S	S
Template Predicted Secondary structure																												.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.								.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		231	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	G	D	F	Q	G	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	H	E	S	R	T	R	K
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions