Return to main results Retrieve Phyre Job Id

Job DescriptionP64624
Confidence71.38%DateThu Jan 5 12:10:00 GMT 2012
Rank254Aligned Residues53
% Identity19%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 












Query SS confidence 






























































Query Sequence  LEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSG
Query Conservation 
   
         
   

  

  
  



 




  

  




 


 

  

  
Alig confidence 













......











....


























Template Conservation 
   
   


   ......  

  
     .... 
  


    
    

  
  
   
Template Sequence  LVKALEKLSFKPSD. . . . . . VRIYSLLLERGG. . . . XRVSEIARELDLSARFVRDRLKVLLKR
Template Known Secondary structure  T


......

....B
T

T
Template Predicted Secondary structure 



......




....







Template SS confidence 






























































   8.10.........20. ........30... ......40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions