 |
Job Description | P64624 | Confidence | 71.38% | Date | Thu Jan 5 12:10:00 GMT 2012 |
Rank | 254 | Aligned Residues | 53 |
% Identity | 19% | Template | d1sfxa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| TrmB-like
|
Resolution | 1.55 |
|
 |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | F | T | I | E | E | V | N | A | D | R | N | V | S | N | N | A | K | N | R | Q | I | V | L | N | L | Y | E | K | G | I | F | D | I | K | D | A | I | N | Q | V | A | D | R | L | N | I | S | K | H | T | V | Y | L | Y | I | R | Q | F | K | S | G |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   | . | . | . | . | . | . |   |   |
|
|   |   |
|   |   |   |   |   | . | . | . | . |   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
Template Sequence |   |
L | V | K | A | L | E | K | L | S | F | K | P | S | D | . |
. |
. |
. |
. |
. |
V | R | I | Y | S | L | L | L | E | R | G | G | . |
. |
. |
. |
X | R | V | S | E | I | A | R | E | L | D | L | S | A | R | F | V | R | D | R | L | K | V | L | L | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|