Return to main results Retrieve Phyre Job Id

Job DescriptionP64624
Confidence94.91%DateThu Jan 5 12:10:00 GMT 2012
Rank10Aligned Residues46
% Identity15%Templated1pdnc_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.........220.........230...
Predicted Secondary structure 











Query SS confidence 






















































Query Sequence  NADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSG
Query Conservation        
   

  

  
  



 




  

  




 


 

  

  
Alig confidence 


...










.




.....


























Template Conservation 


...

   
  

 .
   
..... 
   

  
 

  

 
 
 
    
Template Sequence  GRP. . . LPNNIRLKIVE. MAADG. . . . . IRPCVISRQLRVSHGCVSKILNRYQET
Template Known Secondary structure  TS
...

.TT.....

T

Template Predicted Secondary structure 


...

.

.....






Template SS confidence 






















































   15.. ..20........ .30... ......40.........50.........60
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions