Job Description P64624 Confidence 83.77% Date Thu Jan 5 12:10:00 GMT 2012 Rank 159 Aligned Residues 56 % Identity 9% Template d1ft9a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	E	D	L	V	T	Q	T	L	E	F	T	I	E	E	V	N	A	D	R	N	V	S	N	N	A	K	N	R	Q	I	V	L	N	L	Y	E	K	G	I	F	D	I	K	D	A	I	N	Q	V	A	D	R	L	N	I	S	K	H	T	V	Y	L	Y	I	R	Q	F	K	S	G	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	K	Q	R	I	A	G	F	F	I	D	H	A	N	T	T	G	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	V	I	V	S	V	D	F	T	V	E	E	I	A	N	L	I	G	S	S	R	Q	T	T	S	T	A	L	N	S	L	I	K	E	G
Template Known Secondary structure														T		B				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				S															T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions