 |
Job Description | P64624 | Confidence | 81.14% | Date | Thu Jan 5 12:10:00 GMT 2012 |
Rank | 190 | Aligned Residues | 63 |
% Identity | 17% | Template | c2xigA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:ferric uptake regulation protein; |
PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites
|
Resolution | 1.85 Å |
|
 |
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | |
. | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | V | T | Q | T | L | E | F | T | I | E | E | V | N | A | D | R | N | V | S | N | N | A | K | N | R | Q | I | V | L | N | L | Y | E | K | . |
G | I | F | D | I | K | D | A | I | N | Q | V | A | D | R | L | . |
N | I | S | K | H | T | V | Y | L | Y | I | R | Q | F | K | S | G |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
| . |
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
| . |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   | . | . | . | . | . | . |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|   |
|   |   |
|   |   |   |
Template Sequence |   |
E | S | I | L | E | R | L | R | M | S | I | K | K | N | G | N | . |
. |
. |
. |
. |
. |
S | K | Q | R | E | E | V | V | S | V | L | Y | R | S | G | T | H | L | S | P | E | E | I | T | H | S | I | R | Q | K | D | K | N | T | S | I | S | S | V | Y | R | I | L | N | F | L | E | K | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|