Job Description P64624 Confidence 40.57% Date Thu Jan 5 12:10:00 GMT 2012 Rank 353 Aligned Residues 45 % Identity 18% Template c2h8rA_ PDB info PDB header:transcription activator/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product Resolution 3.20 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	I	V	L	N	L	Y	E	K	G	I	F	D	I	K	D	A	I	N	Q	V	A	D	R	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	K	H	T	V	Y	L	Y	I	R	Q	F	K	S	G	D	F
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	I	L	Y	Q	A	Y	D	R	Q	K	N	P	S	K	E	E	R	E	A	L	V	E	E	C	N	R	A	E	C	L	Q	R	G	V	S	P	S	K	A	H	G	L	G	S	N	L	V	T	E	V	R	V	Y	N	W	F	A	N	R	R	K	E	E	A
Template Known Secondary structure													S	S																					T	T			S	T	T	G	G	G	G	T	T	S																T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions