Job Description P64624 Confidence 70.39% Date Thu Jan 5 12:10:00 GMT 2012 Rank 261 Aligned Residues 68 % Identity 16% Template c1or7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea Resolution 2.00 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	S	S	V	N	F	A	S	S	V	E	D	L	V	T	Q	T	L	E	F	T	I	E	E	V	N	A	D	R	N	V	S	N	N	A	K	N	R	Q	I	V	L	N	L	Y	E	K	G	I	F	D	I	K	D	A	I	N	Q	V	A	D	R	L	N	I	S	K	H	T	V	Y	L	Y	I	R	Q	F	K	S
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		N	F	E	S	G	G	A	N	L	M	L	S	E	E	L	R	Q	I	V	F	R	T	I	E	S	L	.	.	.	.	.	.	.	.	P	E	D	L	R	M	A	I	T	L	R	E	L	D	G	.	.	.	.	.	L	S	Y	E	E	I	A	A	I	M	D	C	P	V	G	T	V	R	S	R	I	F	R	A	R	E
Template Known Secondary structure		S			S	S																					S	.	.	.	.	.	.	.	.													T	T		.	.	.	.	.										T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		233
Predicted Secondary structure
Query SS confidence
Query Sequence		G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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