Phyre 2 alignment of P08339 with d1bev1

Job Description P08339
Confidence 3.24% Date Thu Jan 5 11:01:11 GMT 2012

Rank 20 Aligned Residues 21

% Identity 29% Template d1bev1_

SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4)

Resolution 3.00

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	R	P	W	C	A	R	H	Q	V	R	P	A	W	R	C	Q	Y	D	K	L	H	R	V	P	F
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence	S	C	W	I	P	R	.	.	.	.	A	P	R	Q	A	P	Y	K	K	R	Y	N	L	V	F
Template Known Secondary structure							.	.	.	.					S					S	S	S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
	244	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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