Job Description P07862 Confidence 100.00% Date Thu Jan 5 11:00:37 GMT 2012 Rank 8 Aligned Residues 289 % Identity 36% Template c3se7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:vana; PDBTitle: ancient vana Resolution 3.07 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																																				.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	K	I	G	I	I	F	G	G	V	S	E	E	H	D	I	S	V	K	S	A	R	E	V	A	T	H	L	G	T	G	V	F	E	P	F	Y	L	G	I	T	K	S	G	A	W	Q	L	C	D	G	P	G	E	N	W	E	D	G	N	C	R	P	A	V	L	S	P	D	R	S	V	H	G	L	L	V	L	E
Template Known Secondary structure												S	S	T	T															S		T	T	T										T	T	S						S		S	S	S	S	S	S	S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H	G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M	G	L	P	Y	T	G	S	G	V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	W	V	A	L	T	R	A	E	F	E	K	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	K	Y	E	T	I	R	L	D	L	V	L	P	V	L	H	G	K	L	G	E	D	G	A	I	Q	G	L	L	E	L	S	G	I	P	Y	V	G	C	D	I	Q	S	S	A	L	C	M	D	K	S	L	T	Y	L	V	A	R	S	A	G	I	A	T	P	N	F	W	T	V	T	A	D	E	K	I	P	T	D
Template Known Secondary structure		T	T								S								S	T	T	T	T	S	S													B	S	S											S											T	T		B									T	T	S				T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	K	Q	L	A	E	I	S	A	L	G	L	P	V	I	V	K	P	S	R	E	G	S	S	V	G	M	S	K	V	V	A	E	N	A	L	Q	D	A	L	R	L	A	F	Q	H	D	E	E	V	L	I	E	K	W	L	S	G	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R	I	Q	P	S
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		Q	.	.	.	.	.	.	.	.	.	L	T	Y	P	V	F	V	K	P	A	R	S	G	S	S	F	G	V	S	K	V	A	R	E	E	D	L	Q	G	A	V	E	A	A	R	E	Y	D	S	K	V	L	I	E	E	A	V	I	G	T	E	I	G	C	A	V	M	G	N	G	P	E	L	I	T	G	E	V	D	Q
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.			S	S						S	S			T	T	T	T						S												T	T	T		S										S											T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	F	Y	D	Y	E	A	K	Y	L	S	D	E	T	Q	Y	F	C	P	A	G	L	E	A	S	Q	E	A	N	L	Q	A	L	V	L	K	A	W	T	T	L	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T	S	P	G	M	T	S	H	S	L	V	P	M	A
Query Conservation
Alig confidence				.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.
Template Sequence		I	T	.	.	.	.	.	.	L	S	G	S	D	N	S	A	V	T	V	P	A	D	I	S	T	T	S	R	S	L	V	Q	D	T	A	K	A	V	Y	R	A	L	G	C	R	G	L	S	R	V	D	L	F	L	T	E	D	G	K	V	V	L	N	E	V	N	T	F	P	G	M	T	S	Y	S	R	Y	P	R	M
Template Known Secondary structure				.	.	.	.	.	.				G	G	G	S				S	S																							T													T	T	S									S	S				S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.
Template SS confidence
		231	.							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Q	A	G	M	S	F	S	Q	L	V	V	R	I	L	E	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	A	A	G	L	S	R	A	D	V	I	D	R	L	V	S	L	A
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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