Job Description P07862 Confidence 100.00% Date Thu Jan 5 11:00:37 GMT 2012 Rank 41 Aligned Residues 266 % Identity 20% Template c3orqA_ PDB info PDB header:ligase,biosynthetic protein Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase; PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp Resolution 2.23 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H	G
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																																																										.	.	.
Template Sequence		A	T	I	G	I	I	G	G	G	Q	L	.	.	.	.	.	.	.	.	.	G	K	X	X	A	Q	S	A	Q	K	X	G	Y	K	V	V	V	L	D	P	S	E	D	C	P	C	R	Y	V	A	H	E	F	I	Q	A	K	Y	D	D	E	K	A	L	N	Q	L	G	Q	K	C	D	V	I	T	Y	E	.	.	.
Template Known Secondary structure										S			.	.	.	.	.	.	.	.	.											T	T								S		T	T		T	T	G	G	G	S	S							T	T													S					S	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																																										.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M	G	L	P	Y	T	G	S	G	V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	W	V	A	L	T	R	A	E	F	E	K	G	L	S	D	K	Q	L	A	E	I	S	A	L	G	L	P	V	I	V	K
Query Conservation
Alig confidence		.	.																																																						.	.	.	.	.	.	.
Template Conservation		.	.																																																						.	.	.	.	.	.	.
Template Sequence		.	.	F	E	N	I	S	A	Q	Q	L	K	L	L	C	E	K	Y	N	I	P	Q	G	Y	Q	A	I	Q	L	L	Q	D	R	L	T	E	K	E	T	L	K	S	A	G	T	K	V	V	P	F	I	S	V	K	E	.	.	.	.	.	.	.	S	T	D	I	D	K	A	I	E	T	L	G	Y	P	F	I	V	K
Template Known Secondary structure		.	.	S	T	T	S												S			T	T	T	T								S											T	T			B								S	.	.	.	.	.	.	.	S	T									T		S	S
Template Predicted Secondary structure		.	.																																																						.	.	.	.	.	.	.
Template SS confidence
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130								.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		145	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure					.																																							.
Query SS confidence					.																																							.
Query Sequence		P	S	R	.	E	G	S	S	V	G	M	S	K	V	V	A	E	N	A	L	Q	D	A	L	R	L	A	F	Q	H	D	E	E	V	L	I	E	K	W	L	S	G	.	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R	I	Q	P	S	G	T	F	Y	D	Y	E	A	K	Y	L	S	D	E	T	Q
Query Conservation					.																																							.
Alig confidence					.																										.	.												.																										.	.	.	.	.	.	.
Template Conservation																															.	.																																						.	.	.	.	.	.	.
Template Sequence		T	R	F	G	G	Y	D	G	K	G	Q	V	L	I	N	N	E	K	D	L	Q	E	G	F	K	L	I	E	T	.	.	S	E	C	V	A	E	K	Y	L	N	I	K	K	E	V	S	L	T	V	T	R	G	N	N	N	Q	I	T	F	F	P	L	Q	E	N	E	H	.	.	.	.	.	.	.	R	N	Q	I	L
Template Known Secondary structure			S	S	S			T	T	T	T						S	T	T	S									T	T	.	.	S																						G	G	G													.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																															.	.																																						.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	C	P	A	G	L	E	A	S	Q	E	A	N	L	Q	A	L	V	L	K	A	W	T	T	L	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T	S	P	G	M	T	S	H	S	L	V	P	M	A	A	R	Q	A	G	M	S	F	S	Q	L	V	V	R	I	L
Query Conservation
Alig confidence																																																								.	.						.	.
Template Conservation																																																								.	.						.	.
Template Sequence		F	K	T	I	V	P	A	R	I	D	K	T	A	E	A	K	E	Q	V	N	K	I	I	Q	S	I	H	F	I	G	T	F	T	V	E	F	F	I	D	S	N	N	Q	L	Y	V	N	E	I	A	P	R	P	H	.	.	N	S	G	H	Y	.	.	S	I	E	A	C	D	Y	S	Q	F	D	T	H	I	L	A	V
Template Known Secondary structure							S		S	S															T	T	S														T	T										S	S			.	.	G	G	G	T	T	.	.					B	S	S
Template Predicted Secondary structure																																																								.	.						.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions