Job Description P07862 Confidence 94.43% Date Thu Jan 5 11:00:37 GMT 2012 Rank 107 Aligned Residues 76 % Identity 18% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		M	T	D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H	.	G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M
Query Conservation																																																																	.
Alig confidence																.	.	.	.	.	.	.	.																																										.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		M	R	Q	R	I	L	V	V	D	D	D	A	S	L	.	.	.	.	.	.	.	.	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S
Template Known Secondary structure											S					.	.	.	.	.	.	.	.											T	T									G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.									.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	Y	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	P	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions