Job Description P07862 Confidence 100.00% Date Thu Jan 5 11:00:37 GMT 2012 Rank 19 Aligned Residues 274 % Identity 18% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																															.	.	.	.	.	.	50	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	D	V	T	Q	L	K
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		I	K	K	L	L	V	A	N	R	G	E	I	.	.	.	.	.	.	.	.	.	A	I	R	I	F	R	A	A	A	E	L	D	I	S	T	V	A	I	Y	S	N	E	D	K	S	S	L	H	R	Y	K	A	D	E	S	Y	L	V	G	S	D	L	G	P	A	E	S	Y	L	N	I	E	R	I	I	D	V	A	K
Template Known Secondary structure								S						.	.	.	.	.	.	.	.	.											T	T									S	T	T	T	T		G	G	G	G	S	S	S							S	S			S	S	S	T	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		S	M	G	F	Q	K	V	F	I	A	L	H	G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M	G	L	P	Y	T	G	S	G	V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	.	.	W	V	A	L	T	R	A	E	F	E	K	G	L	S	D	K
Query Conservation																																																																.	.
Alig confidence													.																																																			.	.							.	.	.	.	.	.	.
Template Conservation													.																																																											.	.	.	.	.	.	.
Template Sequence		Q	A	N	V	D	A	I	H	P	G	Y	.	G	F	L	S	E	N	E	Q	F	A	R	R	C	A	E	E	G	I	K	F	I	G	P	H	L	E	H	L	D	M	F	G	D	K	V	K	A	R	T	T	A	I	K	A	D	L	P	V	I	P	G	T	D	G	P	I	K	S	.	.	.	.	.	.	.	Y	E	L
Template Known Secondary structure		T	T	T								S	.	S	S	S	T	T											T	T				S	S	S									S	S											T	T			B					S	S				T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure													.																																																											.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																													.	.	.	.	.	.														.
Query SS confidence																																													.	.	.	.	.	.														.
Query Sequence		Q	L	A	E	I	S	A	L	G	L	P	V	I	V	K	P	S	R	E	G	S	S	V	G	M	S	K	V	V	A	E	N	A	L	Q	D	A	L	R	L	A	F	Q	.	.	.	.	.	.	H	D	E	E	V	L	I	E	K	W	L	S	G	.	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R
Query Conservation																																													.	.	.	.	.	.														.
Alig confidence																																													.	.	.	.	.	.														.
Template Conservation
Template Sequence		A	K	E	F	A	E	E	A	G	F	P	L	M	I	K	A	T	S	G	G	G	G	K	G	M	R	I	V	R	E	E	S	E	L	E	D	A	F	H	R	A	K	S	E	A	E	K	S	F	G	N	S	E	V	Y	I	E	R	Y	I	D	N	P	K	H	I	E	V	Q	V	I	G	D	E	H	G	N	I	V	H
Template Known Secondary structure								S	S		S							S	S				G	G	G						S	T	T	T																S	S											S	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	Q	P	S	G	T	F	Y	D	Y	E	A	K	Y	L	S	D	E	T	Q	Y	F	C	P	A	.	G	L	E	A	S	Q	E	A	N	L	Q	A	L	V	L	K	A	W	T	T	L	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T	S	P	G	M	T	S	H	S
Query Conservation																											.
Alig confidence																.	.	.	.								.																																						.														.	.	.
Template Conservation																.	.	.	.																																														.														.	.	.
Template Sequence		L	F	E	R	D	C	S	V	Q	R	R	H	Q	K	.	.	.	.	V	V	E	V	A	P	S	V	G	L	S	P	T	L	R	Q	R	I	C	D	A	A	I	Q	L	M	E	N	I	K	Y	V	N	A	G	T	V	E	F	L	V	S	G	D	E	.	F	F	F	I	E	V	N	P	R	V	Q	V	E	.	.	.
Template Known Secondary structure											S	S	S			.	.	.	.						S		S	S																				T	T													T	T		.									S			T	T	.	.	.
Template Predicted Secondary structure																.	.	.	.																																														.														.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	M	A	A	R	Q	A	G	M	S	F	S	Q	L	V	V	R	I
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	H	T	I	T	E	M	V	T	G	I	D	I	V	K	T	Q	I	L	V
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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