 |
Job Description | P07862 | Confidence | 86.68% | Date | Thu Jan 5 11:00:37 GMT 2012 |
Rank | 256 | Aligned Residues | 70 |
% Identity | 21% | Template | c2vpiA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:gmp synthase; |
PDBTitle: human gmp synthetase - glutaminase domain
|
Resolution | 2.40 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | D | K | I | A | V | L | L | G | G | T | S | A | E | R | E | V | S | L | N | S | G | A | A | V | L | A | G | L | R | E | G | G | I | D | A | Y | P | V | D | P | K | E | V | D | V | T | Q | L | K | S | M | G | F | Q | K | V | F | I | A | L | H | G | R | G | G | E | D | G | T | L | Q | G | M | L | E | L | M | G |
Query Conservation |   |
|   |   |
|
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
Template Sequence |   |
M | E | G | A | V | V | I | L | D | A | G | A | Q | Y | . |
. |
. |
. |
. |
. |
. |
. |
G | K | V | I | D | R | R | V | R | E | L | F | V | Q | S | E | I | F | . |
P | L | E | T | P | A | F | A | I | K | E | Q | G | F | R | A | I | I | I | S | G | A | P | W | F | D | P | A | I | . |
. |
. |
. |
. |
. |
F | T | I | G |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |
| S | T | T | T | . | . | . | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | . |
| T | T |
|
|  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
|
|
|
|
| G | G | G | . | . | . | . | . | . | G | T | S | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
|
|
. | . | . | . |
  |
  |   |
81 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
L | P | Y | T | G |
Query Conservation |   |
  |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
Template Sequence |   |
K | P | V | L | G |
Template Known Secondary structure |   |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
98 | . | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|