Job Description P07862 Confidence 99.97% Date Thu Jan 5 11:00:37 GMT 2012 Rank 46 Aligned Residues 271 % Identity 17% Template c2r85B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:purp protein pf1517; PDBTitle: crystal structure of purp from pyrococcus furiosus complexed with amp Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																		.	.	.	.	60	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	V	F	I	A	L	H
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	V	R	I	A	T	Y	A	S	H	S	.	.	.	.	.	.	.	.	.	.	A	L	Q	I	L	K	G	A	K	D	E	G	F	E	T	I	A	F	G	S	S	K	V	K	P	L	Y	T	K	Y	F	P	V	A	D	Y	F	I	E	E	K	Y	P	E	E	E	L	L	N	L	N	A	V	V	V	P	T	G
Template Known Secondary structure										S	S	T	T	.	.	.	.	.	.	.	.	.	.											T	T							S		G	G	G						T	T	S				S					S	S									T	T							T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M	G	L	P	Y	T	G	S	G	V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	W	V	A	L	T	R	A	E	F	E	K	G	L	S	D	K	Q	L	A	E	I	S	A	L	G	L	P	V	I	V
Query Conservation
Alig confidence									.	.																.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	V	A	H	L	G	.	.	I	E	L	V	E	N	M	K	V	P	Y	F	G	N	K	.	R	V	L	R	W	E	S	D	R	N	L	E	R	K	W	L	K	K	A	G	I	R	V	P	E	V	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	D	I	E	K	P	V	I	V
Template Known Secondary structure		T							.	.						T		S	S		B	B	S		T	.	T							S											T	T						B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G			S
Template Predicted Secondary structure									.	.																.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																	.	.	.	.	.	.	.	.	.	130	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Query Sequence		K	P	S	R	E	G	S	S	V	G	M	S	K	V	V	A	E	N	A	L	Q	D	A	L	R	L	A	.	.	.	.	.	F	Q	H	D	E	E	V	L	I	E	K	W	L	S	G	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R	I	Q	P	S	G	T	F	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																					.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.
Template Sequence		K	P	.	.	.	.	.	G	K	G	Y	F	L	A	K	D	P	E	D	F	W	R	K	A	E	K	F	L	G	I	K	R	K	E	D	L	K	N	I	Q	I	Q	E	Y	V	L	G	V	P	V	Y	P	H	Y	F	Y	S	K	V	R	E	E	L	E	L	M	S	I	D	R	R	Y	E	S	N	V	D	A	I	G
Template Known Secondary structure				.	.	.	.	.		T	T					S	S												T				S	S	T	T		S	S																				T	T	T	T															G	G	G	G	G
Template Predicted Secondary structure				.	.	.	.	.
Template SS confidence
		132	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
												210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																								.																											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																								.																											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	Y	D	Y	E	A	K	Y	L	S	D	E	T	Q	Y	F	C	P	A	G	L	E	A	S	Q	E	A	N	L	Q	A	L	V	L	K	A	W	T	T	L	.	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T	S	.	P	G	M
Query Conservation		.	.	.	.	.	.	.	.	.	.																																								.																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																								.																											.
Template Conservation
Template Sequence		R	I	P	A	K	D	Q	L	E	F	D	M	D	I	T	Y	T	V	I	G	N	I	P	I	V	L	R	E	S	L	L	M	D	V	I	E	A	G	E	R	V	V	K	A	A	E	E	L	M	G	G	L	W	G	P	F	C	L	E	G	V	F	T	P	D	L	E	F	V	V	F	E	I	S	A	R	I	V	A	G
Template Known Secondary structure		G	S							T	S																		G	G	G																			S	S														T	T	S										S			G	G
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		278	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		T	S	H	S	L	.	.	.	.	V	P	M	A	A	R	Q	A	G	M	S	F	S	Q	L	V	V	R	I	L	E	L	A
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		T	N	I	F	V	N	G	S	P	Y	T	W	L	R	Y	D	R	P	V	S	T	G	R	R	I	A	M	E	I	R	E	A
Template Known Secondary structure		G	G	G	G	T	T			T	T	G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions