Job Description P07862 Confidence 99.41% Date Thu Jan 5 11:00:37 GMT 2012 Rank 78 Aligned Residues 269 % Identity 19% Template c2r7mA_ PDB info PDB header:ligase Chain: A: PDB Molecule:5-formaminoimidazole-4-carboxamide-1-(beta)-d- PDBTitle: crystal structure of faicar synthetase (purp) from m.2 jannaschii complexed with amp Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																								60
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	A	T	L	G	S	.	.	.	.	.	.	.	.	.	.	H	T	S	L	H	I	L	K	G	A	K	L	E	G	F	S	T	V	C	I	T	M	K	G	R	D	V	P	Y	K	R	F	K	V	A	D	K	F	I	Y	V	D	N	F	S	D	I	K	N	E	E	I	Q	E	K	L	R	E	L	N	S	I	V
Template Known Secondary structure							S	S	.	.	.	.	.	.	.	.	.	.	T	T											T	T									T	T	S							T	T			S						S	S	G	G	G	G	G	S										T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.											.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	H	G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M	G	L	P	Y	T	G	S	G	V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P	V	A	P	W	V	A	L	T	R	A	E	F	E	K	G	L	S	D	K	Q	L	A	E	I	S	A	L	G	L	P
Query Conservation
Alig confidence																														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	H	G	S	F	I	A	Y	C	G	L	D	N	V	E	N	S	F	L	V	P	M	F	G	N	R	R	.	I	L	R	W	E	S	E	R	S	L	E	G	K	L	L	R	E	A	G	L	R	V	P	K	K	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	E	D	I	D	G	T
Template Known Secondary structure				B															T			S		B	B	S		G	G	.	G	G																T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G			S
Template Predicted Secondary structure																														.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																	.	.	.	.	.	150	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.																																							.
Query SS confidence																																				.	.	.	.	.	.	.																																							.
Query Sequence		V	I	V	K	P	S	R	E	G	S	S	V	G	M	S	K	V	V	A	E	N	A	L	Q	D	A	L	R	L	A	F	Q	H	D	.	.	.	.	.	.	.	E	E	V	L	I	E	K	W	L	S	G	P	E	F	T	V	A	I	L	G	E	E	I	L	P	S	I	R	I	Q	P	S	G	T	F	Y	D	Y	.
Query Conservation																																				.	.	.	.	.	.	.																																							.
Alig confidence								.	.	.	.	.	.																							.	.	.	.	.	.	.																																							.
Template Conservation								.	.	.	.	.	.
Template Sequence		V	I	V	K	F	P	.	.	.	.	.	.	G	Y	F	I	A	S	S	T	E	E	F	Y	K	K	A	E	D	L	K	K	R	G	I	L	T	D	E	D	I	A	N	A	H	I	E	E	Y	V	V	G	T	N	F	C	I	H	Y	F	Y	S	P	L	K	D	E	V	E	L	L	G	M	D	K	R	Y	E	S	N
Template Known Secondary structure								.	.	.	.	.	.						S	S													T	T	T	S			T	T	T	G	G	G									S											T	T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
																213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	K	Y	L	S	D	E	T	Q	Y	F	C	P	A	G	L	E	A	S	Q	E	A	N	L	Q	A	L	V	L	K	A	W	T	T	L	.	.	.	.	.	.	G	C	K	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	G	L	V	R	I	P	A	K	D	Q	L	E	M	N	I	N	P	S	Y	V	I	T	G	N	I	P	V	V	I	R	E	S	L	L	P	Q	V	F	E	M	G	D	K	L	V	A	K	A	K	E	L	V	P	P	G	M	I	G	P	F	C	L	Q	S	L	C	N	E	N	L	E	L	V	V	F	E	M	S
Template Known Secondary structure						T	T	S							T	S																		G	G	G																			S	T	T														T	T	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		273	.		.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure				.							.	.	.	.
Query SS confidence				.							.	.	.	.
Query Sequence		T	S	.	P	G	M	T	S	H	.	.	.	.	S	L	V	P	M	A	A	R	Q	A	G	M	S	F	S	Q	L	V	V	R	I	L	E	L	A
Query Conservation				.							.	.	.	.
Alig confidence				.							.	.	.	.
Template Conservation
Template Sequence		A	R	V	D	G	G	T	N	S	F	M	N	G	G	P	Y	S	F	L	Y	N	G	E	P	L	S	M	G	Q	R	I	A	R	E	I	K	M	A
Template Known Secondary structure		S	S	B		G	G	G	G	G	G	T	T			T	T	T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions